QuEChERS is a sample preparation technique commonly used in food safety testing for pesticide residue analysis. This two-stage extraction and clean-up technique was developed to streamline sample processing; making it Quick, Easy, Cheap, Effective, Rugged and Safe. ISOLUTE® cSPE for QuEChERS are pre-packed cartridges designed to further improve the efficiency of the QuEChERS clean-up procedure.
Traditionally, clean-up of QuEChERS extracts for pesticide residue analysis relies on dispersive solid phase extraction (dSPE). The dSPE workflow requires that the sample is shaken with the dSPE media and then centrifuged to separate the clean sample extract. Alternatively, ISOLUTE® cSPE for QuEChERS cartridges are packed with QuEChERS ‘dispersive SPE’ sorbent blends allowing convenient flow-through sample processing using column solid phase extraction (cSPE). In addition, the cSPE workflow can be automated on a Biotage® Extrahera™ sample preparation workstation leading to increased throughput, reduced errors, and improved data quality.
This application note describes the extraction of a panel of 76 commonly analyzed pesticides from apple using a two-step QuEChERS workflow. Samples are first homogenized and extracted with ISOLUTE® AOAC QuEChERS extraction salts using the Biotage® Lysera™ bead mill homogenizer. Following centrifugation, an aliquot of extract is cleaned up using ISOLUTE® cSPE for QuEChERS cartridges, processed using a Biotage® Extrahera™ automated sample preparation workstation. Extracts are evaporated using TurboVap™ Dual 96 and analysis is performed using GC-MS.
This application note includes optimised conditions for homogenization, extraction, extract clean-up, evaporation, and analysis.
To demonstrate the versatility of the sample preparation approach, a panel of 76 analytes were selected to reflect a broad range of pesticide classes and chemical characteristics. The pesticides analyzed in this application note are listed below.
Carbofuran 1, Propamocarb, Mevinphos, Acephate, Captan, Carbaryl 1, Methiocarb 1, Propoxur, Ethoprophos, Dimethoate, Carbofuran 2, Atrazine, Quintozene, Pyrimethanil, Diazinon, Parathion-methyl, Carbaryl 2, Metalaxyl, Pirimiphos-methyl, Methiocarb 2, Malathion, Chlorpyrifos, Oxamyl, Cyprodinil, Thiabendazole, Fluopyram, Fipronil, Chlordane, Prallethrin 1, Prallethrin 2, Imazalil, Isoprothiolane, Buprofezin, Myclobutanil, Fludioxonil, Trifloxystrobin, Cyflufenamid, Chlorfenapyr, Penthiopyrad, Quinoxyfen, Propiconazole, DDT, Kresoxim-methyl, Fluopicolide, Tebuconazole, Propargite, Piperonyl butoxide, Iprodione, Fenoxycarb, Bifenthrin, Fluxapyroxad, Acetamiprid, Fenpropathrin, Etoxazole, Fenamidone, Cyflumetofen, Pyriproxyfen, Lambda-Cyhalothrin, Ametoctradin, Permethrin 1, Pyridaben, Permethrin 2, Coumaphos, Cyfluthrin 1, Fenbuconazole, Cyfluthrin 2, Boscalid, Cypermethrin 1, Cypermethrin 2, Cypermethrin 3, Etofenprox, Difenoconazole, Indoxacarb, Azoxystrobin, Famoxadone, Dimethomorph.
Step 1: QuEChERS Extraction: ISOLUTE® AOAC QuEChERS extrac- tion salts (6 g MgSO4 + 1.5 g sodium acetate) p/n Q0010-15V
Step 2: cSPE Clean-up: ISOLUTE® AOAC General 200 mg/3 mL (Tabless), p/n Q0030-0020-BG
15 g of manually diced apple was weighed into a 50 mL centrifuge tube and frozen. 5 g of ceramic beads were added to the centrifuge tube and three samples were homogenized simultaneously using the Biotage® Lysera and 50 mL tube carriage with the following settings:
Note: Freezing the sample aids in a more successful homogenisation and reduces the risk of increased temperatures. Many pesticides are thermally sensitive to any heat generated during sample processing which may result in loss of recoveries for these compounds. Use of the Biotage® Lysera with optional Cryo Cooling Unit can prevent increase of sample temperature, and may protect heat sensitive samples during homogenization.
15 mL of acetonitrile and the QuEChERS AOAC extraction salts (containing 6 g MgSO4 and 1.5 g sodium acetate) were added to the homogenized apple (in the same 50 ml centrifuge tube) and shaken using the Lysera with the following settings:
The samples were then centrifuged for 5 minutes at 5000 RCF. To evaluate the performance of cSPE for QuEChERS clean-up, the supernatant was spiked at a concentration of 96 ppb with a mixture of 76 pesticides (see Additional Information). No internal standards were used.
An excess of 1 mL supernatant from step 1 was transferred into 12 x 75 mm test tubes and placed into the upper processing shelf of the Biotage® Extrahera™ Classic, (position 4, sample rack 12 x 75 mm, 24 positions). The ISOLUTE® AOAC General cSPE cartridges (p/n Q0030-0020-BG) were also placed onto upper processing shelf of the ExtraheraTM Classic (position 3, column rack 24 x 3 mL), while collection vials were placed in the lower collection carousel (position B, collection rack 12 x 75 mm equipped with rack insert). Using the Extrahera™, 1 mL of QuEChERS extract was loaded onto each column. The columns were processed automatically by applying pressure (0.6 bar for 210 seconds, followed by 5 bar for 15 seconds and a 15 second plate dry). Extracts were collected directly into high recovery microsampling GC vials. The GC vials were then transferred directly to the evaporation system.
For options to increase batch size and throughput with minimal sample transfer steps, see Appendix 2.
Post Extraction
Samples were evaporated using the TurboVap® 96 Dual with the following parameters:
Extracts were reconstituted with 30 µL of toluene (added directly to the GC vial) and vortexed prior to analysis.
Table 1. GC conditions
|
Instrument |
Agilent 7890A GC |
|
Column |
Restek Rtx-5MS 30 m x 0.25 mm ID x 0.25 µm |
|
Carrier gas |
Helium 1.2 mL/min |
|
Inlet |
Splitless, 280°C, 50 mL/min at 1 min |
|
Injection volume |
1.3 µL |
|
Wash solvent |
Methanol |
|
Oven settings |
Available on request |
|
Transfer line |
300°C |
Table 2. MS Conditions
|
Instrument |
Agilent 5975C MSD |
|
Source temp |
230°C |
|
Quadrupole temp |
150°C |
|
MSD mode |
SIM |
The monitored ions for each compound are listed in table 3 below. Ions were acquired using Selected Ion Monitoring (SIM) mode.
Table 3. Ions monitored for each analyte
|
Compound |
Quantifier Ion |
1st Qualifier Ion |
2nd Qualifier Ion |
|
Carbofuran 1 |
164 |
149 |
122 |
|
Propamocarb |
58 |
42 |
44 |
|
Mevinphos |
127 |
109 |
192 |
|
Acephate |
136 |
42 |
94 |
|
Captan |
79 |
80 |
77 |
|
Carbaryl 1 |
144 |
115 |
116 |
|
Methiocarb 1 |
168 |
153 |
109 |
|
Propoxur |
110 |
152 |
27 |
|
Ethoprophos |
158 |
43 |
97 |
|
Dimethoate |
87 |
93 |
125 |
|
Carbofuran 2 |
164 |
149 |
122 |
|
Atrazine |
200 |
215 |
58 |
|
Quintozene |
237 |
249 |
295 |
|
Pyrimethanil |
198 |
77 |
199 |
|
Diazinon |
137 |
179 |
152 |
|
Parathion-methyl |
263 |
125 |
109 |
|
Carbaryl 2 |
144 |
115 |
116 |
|
Metalaxyl |
45 |
132 |
206 |
|
Pirimiphos-methyl |
290 |
276 |
305 |
|
Methiocarb 2 |
168 |
153 |
109 |
|
Malathion |
173 |
125 |
93 |
|
Chlorpyrifos |
197 |
97 |
199 |
|
Oxamyl |
72 |
42 |
69 |
|
Cyprodinil |
224 |
77 |
225 |
|
Thiabendazole |
201 |
174 |
63 |
|
Fluopyram |
173 |
145 |
223 |
|
Fipronil |
367 |
369 |
213 |
|
Chlordane |
373 |
375 |
377 |
|
Prallethrin 1 |
123 |
81 |
77 |
|
Prallethrin 2 |
123 |
81 |
77 |
|
Imazalil |
215 |
41 |
173 |
|
Isoprothiolane |
118 |
162 |
189 |
|
Buprofezin |
105 |
106 |
172 |
|
Myclobutanil |
179 |
152 |
181 |
|
Fludioxonil |
248 |
127 |
154 |
|
Trifloxystrobin |
116 |
131 |
59 |
|
Cyflufenamid |
91 |
55 |
118 |
|
Chlorfenapyr |
59 |
60 |
247 |
|
Penthiopyrad |
177 |
302 |
152 |
|
Quinoxyfen |
237 |
272 |
307 |
|
Propiconazole |
173 |
69 |
259 |
|
DDT |
235 |
237 |
176 |
|
Kresoxim-methyl |
116 |
131 |
206 |
|
Fluopicolide |
209 |
210 |
211 |
|
Tebuconazole |
125 |
250 |
70 |
|
Propargite |
135 |
81 |
57 |
|
Piperonyl butoxide |
176 |
149 |
177 |
|
Iprodione |
56 |
316 |
43 |
|
Fenoxycarb |
116 |
88 |
255 |
|
Bifenthrin |
181 |
165 |
|
|
Fluxapyroxad |
159 |
160 |
|
|
Acetamiprid |
56 |
152 |
126 |
|
Fenpropathrin |
97 |
55 |
181 |
|
Etoxazole |
204 |
300 |
141 |
|
Fenamidone |
238 |
237 |
239 |
|
Cyflumetofen |
173 |
145 |
|
|
Pyriproxyfen |
136 |
78 |
77 |
|
Lambda- Cyhalothrin |
181 |
197 |
208 |
|
Ametoctradin |
176 |
190 |
204 |
|
Permethrin 1 |
183 |
41 |
27 |
|
Pyridaben |
147 |
117 |
148 |
|
Permethrin 2 |
183 |
41 |
27 |
|
Coumaphos |
362 |
97 |
109 |
|
Cyfluthrin 1 |
163 |
165 |
206 |
|
Fenbuconazole |
129 |
198 |
125 |
|
Cyfluthrin 2 |
163 |
165 |
206 |
|
Boscalid |
140 |
112 |
142 |
|
Cypermethrin 1 |
163 |
181 |
165 |
|
Cypermethrin 2 |
163 |
181 |
165 |
|
Cypermethrin 3 |
163 |
181 |
165 |
|
Etofenprox |
163 |
135 |
107 |
|
Difenoconazole |
265 |
323 |
267 |
|
Indoxacarb |
59 |
|
|
|
Azoxystrobin |
344 |
388 |
345 |
|
Famoxadone |
330 |
329 |
331 |
|
Dimethomorph |
301 |
165 |
303 |
Using the automated cSPE procedure described in this applica- tion note, a panel of 76 pesticides spiked into apple extracts were cleaned up using cSPE. 72 pesticides demonstrated recovery between the acceptable limits of 70-130%, with the majority between 85 and 90%. Figure 2 shows recoveries obtained from apple extract spiked prior to cSPE clean-up at a concentration equivalent to 96 ppb in raw apple (n=4). Excellent reproducibility was achieved, 74 analytes demonstrating relative standard deviation (RSD) lower than 20% (n=4) with most being lower than 5%. Figure 3 shows %RSD obtained from apple extract spiked prior to cSPE clean-up at a concentration equivalent to 96 ppb in raw apple. Automation of the method ensures variation is kept to a minimum.
Calibration curves were produced for apple extract spiked with pesticides, either within the concentration range 0.8 ppb – 160 ppb or 4 ppb to 800 ppb (equivalent in raw apple) depending on analyte limit of quantitation (LOQ).
To ensure that calibration samples reflect real samples as closely as possible, samples were prepared using pooled apple extract (from QuEChERS step 1). The highest-level spiked sample was prepared at a concentration of 800 ppb. The remaining spiked samples were prepared by a serial dilution of the highest-level spiked sample using additional blank apple extract. 1 mL of each concentration of calibration samples were then cleaned-up using cSPE cartridges.
LOQs were estimated at the lowest concentration of which the analyte gave a signal to noise ratio of 10:1. LOQs of analytes varied across the large panel with most being between 0.8 and 4 ppb. Good linearity was observed for most analytes, typically giving r2 values greater than 0.99. Table 4 below shows the r2 and LOQ values of all analytes.
Table 4. Linearity and LOQ
|
Compound |
r2 |
LOQ (ppb) |
Compound |
r2 |
LOQ (ppb) |
|
Carbofuran 1 |
0.999 |
0.8 |
Kresoxim-methyl |
0.999 |
0.8 |
|
Propamocarb |
0.999 |
0.8 |
Fluopicolide |
0.999 |
0.8 |
|
Mevinphos |
0.992 |
4 |
Tebuconazole |
0.998 |
4 |
|
Acephate |
0.999 |
4 |
Propargite |
0.991 |
4 |
|
Captan |
0.995 |
4 |
Piperonyl butoxide |
0.999 |
0.8 |
|
Carbaryl 1 |
0.999 |
0.8 |
Iprodione |
0.998 |
4 |
|
Methiocarb 1 |
0.999 |
0.8 |
Fenoxycarb |
0.998 |
4 |
|
Propoxur |
0.999 |
0.8 |
Acetamiprid |
0.997 |
4 |
|
Ethoprophos |
0.999 |
0.8 |
Bifenthrin |
0.999 |
0.8 |
|
Dimethoate |
0.990 |
8* |
Fluxapyroxad |
0.999 |
0.8 |
|
Carbofuran 1 |
0.999 |
0.8 |
Fenpropathrin |
0.999 |
0.8 |
|
Atrazine |
0.999 |
0.8 |
Etoxazole |
0.999 |
0.8 |
|
Quintozene |
0.998 |
0.8 |
Fenamidone |
0.999 |
0.8 |
|
Diazinon |
0.999 |
4 |
Cyflumetofen |
0.999 |
0.8 |
|
Pyrimethanil |
0.999 |
0.8 |
Pyriproxyfen |
0.999 |
0.8 |
|
Parathion-methyl |
0.998 |
4 |
Lambda- cyhalothrin |
0.999 |
1.6 |
|
Metalaxyl |
0.999 |
1.6 |
Ametoctradin |
0.999 |
0.8 |
|
Carbaryl 2 |
0.992 |
4 |
Permethrin 1 |
0.999 |
0.8 |
|
Methiocarb 2 |
0.991 |
4 |
Pyridaben |
0.999 |
0.8 |
|
Pirimiphos-methyl |
0.999 |
0.8 |
Permethrin 2 |
0.999 |
0.8 |
|
Malathion |
0.999 |
0.8 |
Coumaphos |
0.999 |
0.8 |
|
Chlorpyrifos |
0.999 |
0.8 |
Fenbuconazole |
0.999 |
0.8 |
|
Oxamyl |
0.999 |
40* |
Cyfluthrin 1 |
0.999 |
8* |
|
Cyprodinil |
0.999 |
0.8 |
Cyfluthrin 2 |
0.999 |
8* |
|
Thiabendazole |
0.998 |
40* |
Boscalid |
0.999 |
0.8 |
|
Fluopyram |
0.999 |
0.8 |
Cypermethrin 1 |
0.999 |
8* |
|
Fipronil |
0.999 |
0.8 |
Cypermethrin 2 |
0.999 |
4 |
|
Chlordane |
0.999 |
0.8 |
Cypermethrin 3 |
0.999 |
8* |
|
Prallethrin 1 |
0.999 |
4 |
Etofenprox |
0.999 |
0.8 |
|
Prallethrin 2 |
0.998 |
4 |
Difenoconazole |
0.992 |
4 |
|
Imazalil |
0.999 |
0.8 |
Indoxacarb |
0.995 |
8* |
|
Isoprothiolane |
0.999 |
0.8 |
Azoxystrobin |
0.996 |
4 |
|
Fludioxonil |
0.994 |
4 |
Famoxadone |
0.987 |
4 |
|
Buprofezin |
0.999 |
0.8 |
Dimethomorph |
0.999 |
1.6 |
|
Myclobutanil |
0.999 |
0.8 |
*analytes have higher LOQs than most of the panel so have less than 6 calibration points |
||
|
Trifloxystrobin |
0.999 |
0.8 |
|||
|
Cyflufenamid |
0.999 |
0.8 |
|||
|
Chlorfenapyr |
0.999 |
0.8 |
|||
|
Penthiopyrad |
0.999 |
0.8 |
|||
|
Quinoxyfen |
0.999 |
0.8 |
|||
|
Propiconazole |
0.998 |
4 |
|||
|
DDT |
0.998 |
0.8 |
|||
Calibration curves for selected pesticides are show in figures 4-7 below.
The use of ISOLUTE® cSPE for QuEChERS cartridges provides a simple, robust flow-through clean-up of QuEChERS extracts from apple samples for pesticide analysis. The cartridges deliver high recoveries, low RSDs and exceptionally clean extracts.
Excellent linearity was achieved across a wide calibration range for all analytes, demonstrating that the flow-through cSPE approach provides consistent analyte recovery and matrix removal at all concentration levels, with LOQ typically < 1 ppb.
When automated using a Biotage® Extrahera™ workstation, a batch of 24 samples can be processed in 10.3 minutes (15.1 minutes for 48 samples). ISOLUTE® cSPE for QuEChERS
cartridges provide a simplified extract clean-up workflow when compared to the dSPE equivalent (see figure 8 , page 7). This results in fewer manual transfer steps and higher throughput. In comparison, the equivalent dSPE clean-up procedure takes 23.5 minutes for a batch of 24 samples (47 minutes for 48 samples).
Traditionally QuEChERS using dSPE for clean-up does not utilize a concentration step. However, standard QuEChERS methods (AOAC, EN and mini-multiresidue) allow for an evaporative concentration step where large volume injection GC-MS analysis is not used, or where solvent exchange from acetonitrile is beneficial. Typically, a concentration factor of x 4 is utilized.
In order to improve our working sample concentration range we incorporated a post clean-up evaporation and reconstitution step. After cSPE clean-up the extract was evaporated to dryness under highly controlled conditions using the TurboVap® 96 Dual, and reconstituted in a total volume of 30 µL of toluene, from which 1.3 µL was injected. No significant evaporative losses were observed. This represents a 30 x increase in analyte concentration injected into the GC-MS system, and allows for a more appropriate injection solvent for GC-MS analysis. The higher concentration factor allows for improved sensitivity (lower analyte LOQ) using the single quadrupole GC-MS system. It is expected that LOQs could be further improved using a higher sensitivity / more selective GC-MS/MS system.
The improved cleanliness of the extract from the flow through cSPE process (more efficient matrix removal) compared with dSPE means that the more concentrated sample extract (x 30 compared with x 4) can be injected without compromising the GC system or analyte separation.
The focus of this application note is evaluation of the automated clean-up step using cSPE cartridges. Therefore, to provide homogenous samples for comparison purposes, supernatants prepared in step 1 were pooled and spiked appropriately with pesticide standards. 1 mL aliquots of the pooled supernatants were used for evaluation of the cSPE clean-up step.
For recovery testing, the pooled sample was spiked at a concentration of 120 ng/mL which equates to 96 ppb in raw apple matrix. This is calculated with the assumption that 15 g of apple matrix with QuEChERS salts results in 12 mL of superna- tant for cSPE clean up. Supernatant volumes will be dependent on matrix type and initial QuEChERS salt used.
For determination of linearity and LOQ, the highest-level spiked sample was prepared at a concentration of 800 ppb. The remaining spiked samples were prepared by a serial dilution of the highest-level spiked sample with the pooled blank apple extract.
No internal standardisation was used in this application note, however if used, we would recommend that appropriate internal standards were added to the homogenised matrix along with acetonitrile and QuEChERS salts during step 1, prior to mixing and subsequent centrifugation.
The use of the tapered bottom microsampling vials (Agilent p/n 5184-3550) for extract collection, evaporation and reconstitu- tion reduces variability in this step. Pre- and post-evaporation samples in tapered bottom vials are illustrated in figure 9 below. Pre-evaporation sample (left) consists of 1 mL of apple extract in acetonitrile after passing through the cSPE cartridge (Q0030-0020-BG). Post-evaporation sample (right) is the same extract after evaporation to dryness and reconstitution in 30 µL toluene (30 x concentration factor). Direct to GC vial elution eliminates the need for sample transfer for evaporation, and further reduces the risk of analyte loss.
This approach allows us to enhance the sensitivity of our GC-MS single quad, with 30 x higher on column concentration range vs raw sample range.
|
Biotage® consumables ordering information |
||
|
Part Number |
Description |
Pack Size |
|
Homogenization and QuEChERS extraction used in this application note |
||
|
Q0010-15V |
Extraction salts: ISOLUTE® QuEChERS AOAC 15 g/15 mL Extraction Tube |
25 |
|
19-6650 |
Bulk 50 mL Tubes with Leak Proof Screw Caps |
100 |
|
19-646 |
Bulk 2.8 mm Ceramic Beads, 325 g |
1 |
|
QuEChERS Clean-up used in this application note |
||
|
Q0030-0020-BG |
cSPE: ISOLUTE® AOAC General 200 mg/3 mL (Tabless) |
50 |
|
414141 |
1000 µL Clear Tips |
960 |
|
Biotage ® equipment & accessories ordering information |
||
|
Part Number |
Description |
Pack Size |
|
Homogenization and QuEChERS extraction |
||
|
19-060 |
Biotage® Lysera |
1 |
|
19-345-050 |
50 mL Tube Carriage Kit |
1 |
|
QuEChERS Clean-up |
||
|
414001 |
Biotage® Extrahera™ Classic |
1 |
|
417002 |
Biotage® Extrahera™ HV-5000 |
1 |
|
414174SP |
Column Rack 24 x 3 mL |
1 |
|
415555SP |
Sample/Collection Rack 12 x 75 mm, 48 Positions |
1 |
|
414511SP |
Collection Rack 12 x 75 mm, 24 Positions |
1 |
|
414578SP |
Inserts For 12 x 32 mm Vials For Collection Rack 12 x 75 mm 24 positions |
24 |
|
414256SP |
Sample Rack 12 x 75 mm, 24 Positions |
1 |
|
Evaporation |
||
|
418000 |
TurboVap® 96 Dual |
1 |
|
418319SP |
Rack 12 x 32 mm, 24 Positions |
1 |
|
ISOLUTE® cSPE for QuEChERS range |
||
|
Selection of the appropriate product depends on regulation (AOAC or EN) and matrix type. |
||
|
Part Number |
Description |
Pack Size |
|
QuEChERS extraction |
||
|
Q0010-15V |
Extraction salts: ISOLUTE® QuEChERS AOAC 15 g/15 mL Extraction Tube |
25 |
|
Q0020-15V |
Extraction salts: ISOLUTE® QuEChERS EN 10 g/15 mL Extraction Tube |
25 |
|
QuEChERS Clean-up |
||
|
Q0030-0020-BG |
ISOLUTE® AOAC General 200 mg/3 mL (Tabless) |
50 |
|
Q0035-0020-BG |
ISOLUTE® EN General 200 mg/3 mL (Tabless) |
50 |
|
Q0050-0035-BG |
ISOLUTE® AOAC Waxed 350 mg/3 mL (Tabless) |
50 |
|
Q0060-0035-BG |
ISOLUTE® EN Waxed 350 mg/3 mL (Tabless) |
50 |
|
Q0070-0015-BG |
ISOLUTE® AOAC Pigment 150 mg/ 3 mL (Tabless) |
50 |
|
Q0080-0030-BG |
ISOLUTE® EN Pigment 300 mg/3 mL (Tabless) |
50 |
|
Q0090-0050-BG |
ISOLUTE® EN High Pigment 500 mg/3 mL (Tabless) |
50 |
The cSPE clean-up method described in this application note was automated on the Biotage® Extrahera™ Classic. This appendix contains the software settings required to configure Extrahera™ Classic to run this method for a 1 mL sample aliquot.
|
Sample plate/rack |
12 x 75 mm, 24 |
|
Extraction media |
1 mL Column Rack, 24 (ISOLUTE® AOAC General) |
|
Sample Load |
Off |
|
Collection |
On |
Screenshot Settings
As part of the QuEChERS workflow, use of the Biotage® Lysera for initial sample pre-treatment and extraction (QuEChERS step 1) reduces the need for manual steps, saving time and reducing the possibility of manual handling errors. The need to clean a blending device in-between each sample is eliminated and an even homogenisation between each sample is ensured.
In this application note, ISOLUTE® AOAC QuEChERS extraction salts (p/n Q0010-15V) optimized for extraction of 15 g of sample matrix were used to prepare samples in 50 mL tubes, for the initial extraction step.
In place of manually shaking samples by hand, 3 x 50 mL tubes can be shaken simultaneously in 15 seconds using the Biotage™ Lysera.
Using the Biotage® Extrahera™ HV-5000 platform for automated clean-up (instead of the Extrahera™ Classic platform used for this application note), 50 mL extraction tubes from the initial homogenization and extraction step can be transferred directly to the Extrahera™ HV-5000 after centrifugation, eliminating a manual sample transfer step. The supernatant can then be aspirated directly from the 50 mL centrifuge tube to the cSPE cartridge utilizing the Extrahera’s ‘Smart Pipetting’ function, ensuring no particulate is transferred. A maximum of 12 samples can be processed using 50 mL tubes.
Increasing batch size and sample throughput with minimal manual sample transfer
As an alternative to 50 mL tubes for homogenization and extraction, Biotage® Lysera can be used to homogenize samples in smaller tubes (30 mL, 7 mL) simultaneously processing batch sizes of up to 12 samples.
Reduction of the starting mass of sample, for example from 15 g to 5 g or 2 g, extracted with an appropriately reduced wight of extraction salt, and utilizing smaller extraction tubes can lead to increased batch size and further reduction in overall processing time.
After centrifuging these can be transferred directly to the Extrahera™ HV-5000 for cSPE clean-up, with no additional manual sample transfer steps. These options are summarized in the table below.
|
Matrix sample size |
Extraction tube volume |
Biotage® Lysera capacity |
Maximum batch size using Biotage® Extrahera™ 5000 |
|
10-15 g |
50 mL |
3 tubes |
12 |
|
5-10 g |
30 mL |
6 tubes |
12 |
|
1.5-2.5 g |
7 mL |
12 tubes |
24 |
Alternatively, a manual transfer of the supernatant into test tubes can be included after QuEChERS extraction, which can then be processed in a batch size of up to 48.
Clean-up of pre-extracted samples using ISOLUTE® cSPE for QuEChERS cartridges can be performed manually using the Biotage® Pressure+ 48 Positive Pressure Manifold or Biotage® VacMaster™ -20. Processing parameters are available on request.
Literature Number: AN995